BIO 208 MICROBIOLOGY - Syllabus and Course Policies
A. General Information This course is a one-semester survey of microbiology required for Biology majors and minors, dietetics majors, and public health majors.
B. Course Logistics
Meeting Times and Locations: Lectures meet Mon. and Wed. from 9:00-9:50 in Brooks 176. Labs are scheduled for 2, one hour and fifteen minute periods per week in Brooks 130. Each lab section is limited to 18 students and the course is typically filled to capacity; as a result it is not possible to attend lab sections other than the one for which you have enrolled unless someone drops and you are able to change sections via the registrars office.
Instructor: Tom Schultz
email: schul1te@cmich.edu (note: this is the best way to reach me)
Office hours: Tue. 9-11am & Thu. 2 4pm in Brooks 132.
Phone: 774-3279
C. Materials Needed
1. Textbook: Tortora, G.J., B.R. Funke, and C.L. Case. 2004. Microbiology. An Introduction. Eighth ed. Benjamin/Cummings Publishing Co., Inc. Redwood City, CA. 898p. With CD-Rom. ISBN: 0-8053-7613-5. Alternatively, the Seventh ed. (white cover) is perfectly acceptable too.
2. Laboratory Manual: Course Pack.
3. Access to the World Wide Web and an e-mail account. I will be posting many class materials on the Web, and expect every student to check the Web site for announcements at least once a week. I can be reached more easily by e-mail than by any other method, and will reply to any concern or question you raise if you have an e-mail account.
4. Microscope slides with cover slips*
5. Colored pencils*
6. Sharpie marker (black or blue ink)*
*Note: There is a possibility of these items being packaged in a "S.A.M. Kit" which may be purchased at a discounted price through the student organization "Students Association for Microbiology"
7. Optional: Alexander, S.K. and D. Strete. 2001. Microbiology A Photographic Atlas for the Laboratory. Benjamin/Cummings Publishing Co., Inc. Redwood City, CA. 193p. ISBN: 0-8053-2732-0
D. Reading Assignments
Reading assignments in the text are listed with the topic outline. Readings and lecture will complement each other. I cannot cover every detail in lecture and will expect you to supplement lectures with certain information from the text. Dont fall behind. Try to read the assignment before each class, or at the very latest on the same day as class. Work with the "Learning Objectives" to focus your attention on the key concepts in each passage and chapter end "Study Questions" to test your reading comprehension. Answers to chapter end study questions can be found here: www.microbiologyplace.com
E. Tests and Grades
Three lecture tests will be given. The final exam will cover the final unit of material in the course as well as a cumulative review of important themes from the entire course. The 3 lecture tests will be given during scheduled class times. Be on time! Since there is a class immediately before this one and a class immediately following you will only have the allotted class time to complete the exam. Makeup tests are available only to students who have a legitimate excuse for missing an exam, such as personal illness or injuries requiring a doctor's visit, sanctioned athletic team event out of town, or death in the immediate family. If you know in advance that you must miss a test, see me in advance and bring documentation to support your anticipated absence. If you miss an exam unexpectedly because of last-minute illness or accident, contact me when you return to campus (or by phone or email if you will be away for some time) with documentation of your situation. MAKE-UP TESTS WILL BE GIVEN ONLY FOR EXCUSED ABSENCES AND ONLY ON FRIDAY MAY 5th AND AT NO OTHER TIME IN THE SEMESTER FOR ANY REASON.
Schedule for Tests:
Test 1 Unit 1 Wed 2/1 9:00-9:50 Brooks 176
Test 2 Unit 2 Wed 3/1 9:00-9:50 Brooks 176
Test 3 Unit 3 Mon 4/3 9:00-9:50 Brooks 176
Final Exam Mon 5/1 8:00-9:50 Brooks 176
Final Exam Policy This is the University policy on scheduling of final exams: "Students scheduled for more than three examinations on the same day may arrange to have the examination in excess of three [that means the 4th one] rescheduled for another time during the examination week." Since our Final begins at 8 am, I do not anticipate rescheduling a final for anyone.
Grading
Three in class exams 450 pts
Final comprehensive exam 200 pts
Laboratory quizzes 100 pts
Laboratory Reports 250 pts
Total possible 1000 pts
Grading Scale
|
A |
A- |
B+ |
B |
B- |
C+ |
C |
C- |
D+ |
D |
D- |
E |
|
930+ |
900-929 |
870- |
840- |
800-839 |
770-799 |
740-769 |
700-739 |
670-699 |
640-669 |
600-639 |
0-599 |
Extra credit
There will be a number of extra credit opportunities in both lecture and lab. You can get up to a maximum of 20 points. Click on the link below to see extra credit opportunities outside class and the due dates. "In-lab" opportunities will be announced in your lab section.
F. Laboratory
The separate lab schedule lists exercises to be done. You should come to lab having read the lab exercise beforehand! You are expected to attend the laboratory section for which you have registered. You must contact your lab instructor prior to an absence if you cannot attend a specific lab. You must bring official documentation if you are missing a lab due to illness or other emergency to facilitate our record keeping and aid in our evaluation. Please do not miss a laboratory unless there is a valid emergency. The laboratory requires intensive preparation and it may not be possible for us to set up a missed laboratory for you at a later time. The laboratory instructors may use their own discretion in allowing make-ups. Any missed lab must be "made up" within 1 week of absence. Failure to follow these guidelines will result in a reduction or forfeiture of points for the missed laboratory exercises. Your grade for the lab will be determined from a combination of quizzes and homework/laboratory assignments. In addition, laboratory material will comprise approximately 30 - 40% of each lecture test. You must pass the laboratory portion in order to pass the course. More detail regarding laboratory grading will be given by your TA.
G. University Policies
Students requiring accommodations
CMU provides students with disabilities reasonable accommodation to participate in educational programs, activities or services. Students with disabilities requiring accommodation to participate in class activities or meet course requirements should first register with the office of Student Disability Services (250 Foust Hall, telephone #989-774-3018, TDD #2568), and then contact me as soon as possible.
Policy on academic integrity
In May 2001, the Central Michigan University Academic Senate approved the Policy on Academic Integrity, which applies to all university students. Copies are available on the CMU website at http://academicsenate.cmich.edu/noncurric.htm, and in the Academic Senate Office in room 108 of Bovee University Center. All academic work is expected to be in compliance with this policy.
Classroom civility
Each CMU student is encouraged to help create an environment during class that promotes learning, dignity, and mutual respect for everyone. Students who speak at inappropriate times, sleep in class, display inattention, take frequent breaks, interrupt the class by coming to class late, engage in loud or distracting behaviors, use cell phones or pagers in class, use inappropriate language, are verbally abusive, display defiance or disrespect to others, or behave aggressively toward others could be asked to leave the class and subjected to disciplinary action under the Code of Student Rights, Responsibilities and Disciplinary Procedures.
Detailed Information on this course is available on the course web page at:
http://www.cst.cmich.edu/users/schul1te/
BIO 208 MICROBIOLOGY - Tentative Lecture Schedule
|
Date |
Lecture Topic |
Reading in Text (8th ed.) |
|
M 1/9 |
Unit 1. The Microbial World and You CH 1: What Are Microbes? What is Microbiology? |
pp. 1-6, 16-21 |
|
W 1/11 |
CH 1: How Did Microbiology Become a Science? |
pp. 6-16; 413-415 |
|
M 1/16 |
Martin Luther King Jr. Holiday no labs |
|
|
W 1/18 |
Classification of Microbes / CH 3: How Do We See Microbes? |
pp. 276-284; 54-66 |
|
M 1/23 |
continued CH 4: Anatomy of Prokaryotic Cells |
pp. 75-78; 87-96 |
|
W 1/25 |
continued |
pp.79-86; 66-71 |
|
M 1/30 |
CH 4: Origin of Eukaryotic Cells / End Material For Test 1 |
pp. 96 & 106 |
|
W 2/1 |
TEST 1 - UNIT 1 |
|
|
M 2/6 |
Unit 2. How Do Microbes Grow? CH 6: Characteristics of Microbial Growth |
pp. 139-144; 170-179 |
|
W 2/8 |
CH 6: Effects of the Physical Environment on Microbial Growth |
pp.156-163 |
|
M 2/13 |
CH 7: Control of Microbial Growth |
CH 7: entire; 559-564 |
|
W 2/15 |
CH 5: General characteristics of metabolism, enzymes, redox |
pp. 111-122 |
|
M 2/20 |
CH 5: Carbon and Energy from Organic Chemicals; Carbohydrate catabolism |
pp. 122-124 |
|
W 2/22 |
CH 5: Fermentation / Aerobic Respiration |
pp. 132-134; 124-131 |
|
M 2/27 |
CH 5: Anaerobic Respiration / Autotrophy / Anabolism End Material for Test 2 |
pp. 130-132; 136-138; 144-148 |
|
W 3/1 |
TEST 2 UNIT 2 |
|
|
M-F 3/6-10 |
SPRING BREAK |
|
|
M 3/13 |
Unit 3. Microbial Genetics and Viruses CH 8: Nucleic Acids / How Prokaryotes Replicate DNA |
pp. 47-49; 211-217 |
|
W 3/15 |
CH 8: Converting DNA into RNA and Proteins |
pp. 217-222 |
|
M 3/20 |
CH 8: Gene Regulation in Prokaryotes/ Genetic Transfer |
pp. 222-228; 234-243 |
|
W 3/22 |
CH 13: Viruses - General Characteristics and Bacteriophages |
pp. 376-384; 386-390 |
|
M 3/27 |
CH 13: Viruses - Animal Viruses |
pp. 384-386; 390-402 |
|
W 3/29 |
Animal viruses continued / End Material for Test 3 |
pp. 384-386; 390-402 |
|
M 4/3 |
TEST 3 - UNIT 3 |
|
|
W 4/5 |
Unit 4. Survey - Role of Microbes in Health and Disease CH 27: Environmental Microbiology |
CH 27: entire |
|
M 4/10 |
continued |
CH 27: entire |
|
W 4/12 |
Disease and Epidemiology |
CH 14: entire |
|
M 4/17 |
CH 21: Microbial diseases of the skin; CH 22: nervous system; CH 23: cardiovascular and lymphatic systems |
pp. 590-597; 616-619; 640-642; 650-654 |
|
W 4/19 |
CH 24: Microbial diseases of the respiratory system |
pp. 681; 692-694 |
|
M 4/24 |
CH 25: Microbial diseases of the digestive system; food poisoning |
pp. 709-715 |
|
W 4/26 |
Bioterrorism |
pp. 646-647 (box on 648-649) |
|
M 5/1
|
FINAL EXAM - Comprehensive 8:00-9:50 am Brooks 176 |
|
BIO 208 MICROBIOLOGY - Tentative Laboratory Schedule
|
Date |
|
|
January M,T - 9,10 |
Unit 1. Microbes Are Everywhere Laboratory Check-in. Start Exercise 1 - Microbes Are All Around Us. |
|
W,R - 11,12 |
Finish Exercise 1. Start Exercise 2 - Making Media. |
|
M,T - 16,17 |
Martin Luther King Jr. Holiday no labs |
|
W,R - 18,19 |
Finish Exercise 2 and collect Exercises 1 and 2. Start and complete Exercise 3 - Observing Microbes. |
|
M,T - 23,24 |
Quiz 1 Labs 1-4. Collect Exercise 3. Start/complete Exercise 4 - Aseptic Technique and Simple Staining. |
|
W,R - 25,26 |
Collect Exercise 4. Start Exercise 5 - The Gram Stain Technique. |
|
M,T 30,31
|
Collect Exercise 5. Start and complete Exercise 6 - Acid-Fast and Structural Stains. TAs ό Exercise 6 in class but will not collect. All graded exercises will be returned.End Material For Test 1 (covers labs 1-6). |
|
February W,R - 1,2 |
Unit 2. How Do Microbes Grow? Start Exercise 7 - Culturing Bacteria. |
|
M,T - 6,7 |
Complete and collect Exercise 7. |
|
W,R - 8,9 |
Start Exercise 8 - Control of Microbial Growth. |
|
M,T - 13,14 |
Complete and collect Exercise 8. |
|
W,R - 15,16 |
Quiz 2 Labs 5 - 8. Start Exercise 9 - Enzyme Action and Carbohydrate Catabolism |
|
M,T 20,21 |
Complete and collect Exercise 9. Start Exercise 10 - Using Metabolic End Products. |
|
W,R 22,23 |
Complete and collect Exercise 10. Start Exercise 11 - Respiration. |
|
M,T 27,28
|
Complete and collect Exercise 11. End Material For Test 2 (covers labs 7-11) |
|
March W,R 1,2 |
Start, complete, and collect Exercise 12 - Autotrophy. |
|
M,T 6,7 W,R 8,9 |
Spring Break, no labs |
|
M,T 13,14 |
Unit 3. Microbial Genetics and Viruses Start and complete Exercise 13 - Isolation of DNA. Start Exercise 14 - Electrophoresis of DNA. |
|
W,R 15,16 |
Quiz 3 Labs 9-14. Collect Exercise 13. Complete Exercise 14. |
|
M,T 20,21 |
Collect Exercise 14. Start Exercise 15 - Transfer of Genetic Information. |
|
W,R 22,23 |
Complete and collect Exercise 15. Start Exercise 16 - Bacteriophages. |
|
M,T 27,28 |
Complete and collect Exercise 16 (returned W,R). End Material for Test 3 (covers Labs 13-16). |
|
W,R 29,30 |
Unit 4. Survey of Microbes in Health and Disease Start Exercise 17 - Microbiology and the Food Industry. |
|
April M,T 3,4 |
Complete and collect Exercise 17 Part II. Start Exercise 18 - Microbial Ecology and Environmental Microbiology. |
|
W,R 5,6 |
Continue Exercise 18. Complete and Collect Part I - Microbes in the Soil. |
|
M,T 10,11 |
Start and Complete Exercise 19 - Disease Transmission. Continue Exercise 18. |
|
W,R 12,13 |
Quiz 4 Labs 15-18. Complete and collect Exercise 18 Part II - Bacteriological Analysis of Water Quality. Start Exercise 20 - Microbes of the Skin. |
|
M,T 17,18 |
Collect Ex.17 Part I. Complete/collect Exercise 20. Start Exercise 21 - Microbes of the Respiratory Tract. |
|
W,R 19,20 |
Complete and collect Exercise 21. Start Exercise 22 - Urinalysis and Microbes of STDs. |
|
M,T 24,25 |
Quiz 5 labs 19-22. Collect Exercises 22. Laboratory checkout. All graded exercises can be picked up at your TAs office Friday April 29 |
|
W,R 26,27 |
No scheduled laboratories |