Tentative schedule – Any changes to the schedule during the semester will be posted here!

A note about lecture notes – I have posted fairly detailed but not all inclusive notes. I suggest that you print the notes off and bring them with you to class. That way you will have more time during class to focus on the concepts, study the pictures, and to formulate questions. However, as I am constantly revising the notes, don’t print them out too far in advance.

DATE

LECTURE TOPIC

READING

LABORATORY TOPIC

SUPPLEMENTAL WEB SITES

M

Aug 24

Course introduction; Dynamics of infectious disease – lecture notes

Concept Check 1

 

Ch. 1

Diagnostic Principles

Lab 1 - Gram stain and streak plate isolation

 

W

Aug 26

UNIT 1 - THE PLAYERS

Part A - Review of the microbes

Viruses and bacteria – lecture notes

Concept Check 2 - available on Black Board Assignments

 

Ch. 2, 3

 

Lab 2 - Colony morphology

Lab 3 - Initial grouping of clinical isolates

 

View animation - Virus infecting a host cell

View animation - Herpes virus infection

View animation - Bacteria and binary fission

M

Aug 31

Eucaryotic microbial pathogens and normal microbiota

Answers to normal microbiota causing opportunistic infections - available on BB

Ch 4 - 8

Lab 4 - Identification of Gram-positive cocci

View video - Normal flora 1

View video - Normal flora 2

Normal microbiota of the Human Body

W

Sep 2

Part B - Host defenses

Nonspecific host defenses against microbial invaders – lecture notes

Concept Check 3 – available on BB

 

Ch. 9

 

GPC continued

 

 

View animation - Membrane attack complex

M Sep 7

Labor Day - No Class

 

 

 

W

Sep 9

Nonspecific defenses continued

 

QUIZ 1 – Practical - Labs 1-4

 

 

M

Sep 14

Specific host defenses against microbial invaders – lecture notes

Concept Check 4

Ch 10, 11

Lab 5 - Identification of Enterobacteriaceae

View video - Clonal expansion

 

T Sep 15

.

 

Read KIA results from Lab 5

 

W

Sep 16

Specific defenses continued

 

 

Enterobacteriaceae continued

 

M

Sep 21

No Lecture – I will be available for last minute questions, in my office (BR 157) from 1-1:50 pm.

 

TEST ONE - UNIT ONE

 

 

W

Sep 23

UNIT 2 - HOST AND PATHOGEN CONFLICTS

How are pathogens acquired and transmitted? – lecture notes

 

Ch 12, 13

 

Lab 6 – Identification of Oxidase-positive, Gram-negative Rods

 

M

Sep 28

Topic from Wed continued

Concept Check 5

Ch 14, 15

Lab 7 – Identification of Gram-negative cocci

Lab 8 – Identification of Gram-positive rods

 

W

Sep 30

How do pathogens escape nonspecific host - lecture notes

 

QUIZ 2 – Practical - Labs 5-8

Lab 9 – Introduction to Anaerobes

 

Avoiding Phagocytosis

M

Oct 5

Microbial spread and replication, read before Mon Oct 5 lecture – all material on-line

 

How do pathogens escape specific host defenses?- lecture notes

Concept Check 6– now available on BB

Ch. 16

Anaerobes continued

AND Bacterial Unknown assigned to Grad students

 

W

Oct 7

What are the pathological consequences of microbial infection? – lecture notes - updated

Ch. 17

Lab 10 – Intro to Yeasts

Lab 11 – Intro to Molds

Transmission of TB

Tuberculosis Study Module

M

Oct 12

Pathological consequences continued

Grads – Unknown Report due 1 pm

 

 

 

W

Oct 14

No Lecture

 

 

 

 LABORATORY PRACTICAL EXAM

Laboratories 1 through 11

 

M

Oct. 19

No Lecture

 

TEST TWO - UNIT TWO CON’T

Comprehensive with an emphasis on Unit 2

 

W

Oct 21

 

UNIT 3 – CLINICAL MANIFESTATIONS OF INFECTION

Introduction to Clinical Case Problem-Solving - lecture notes.

Infections of the Respiratory System – URT - lecture notes and practice case

 

 

 

 

Ch. 18

 

Case solving guidelines

 

How to approach the laboratory investigation of clinical cases; continuing with our practice case

 

 

.

M

Oct 26

Continue with LRTI

Case 1 assigned

Ch. 19

 

Clinical specimen received

 

T-F

Continue working on cases, no W lecture

M

Nov 2

Clinical Case 1 due 1pm

QUIZ 3 –RTI

Urinary Tract Infections and Sexually Transmitted Infections – lecture notes – Case 2 assigned

 

 

Chs. 20, 21

 

 

 

 

Clinical specimen received

 

 

 

T-F

Continue working on case; no W lecture

M

Nov 9

Clinical Case 2 due 1pm

QUIZ 4 – UTI and STII

Infections of the Gastrointestinal - lecture notes

Case 3 assigned

 

 

Ch. 22

 

 

 

Clinical specimen received

 

 

Charts of Diseases

T-F

Continue working on case; no W lecture

 

 

 

M

Nov 16

Clinical Case 3 due 1pm

QUIZ 5 – GI

Infections of the Nervous System – lecture notes

Case 4 assigned

 

 

Ch 24

 

 

 

Clinical specimen received

 

T-F

Continue working on case; no W lecture

 

 

 

M

Nov 23

Clinical Case 4 due 1 pm

QUIZ 6 – Nervous

Infections of the skin and wounds – lecture notes

Case 5 assigned

 

 

Ch 26

 

 

 

Clinical specimen received

 

Arboviruses

BSL 2

BSL 3

BSL 4

Rabies Links

T-W

Continue working on case; no W lecture

 

Work on solving case – the University does not close for Thanksgiving recess until 5pm Wed.

 

R Nov 26

Thanksgiving

 

 

 

M

Nov 30

QUIZ 7 – SKIN

Antimicrobial action – lecture notes

 

Ch. 33

Lab 23 – Antibiotic Susceptibility Testing

 

T

Dec 1

 

 

Check lab results

 

W

Dec 2

Clinical Case 5 due 1 pm

Antimicrobial action continued

 

 

 

W

Dec 9

FINAL EXAM

Comprehensive with an emphasis on Units 3 and 4

BR 201 12:00 – 1:50 pm